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Annotation of OpenXM/src/asir-contrib/packages/doc/phc.oxweave, Revision 1.1

1.1     ! takayama    1: /* $OpenXM$ */
        !             2:
        !             3:
        !             4: /*&C-texi
        !             5: @c DO NOT EDIT THIS FILE   oxphc.texi
        !             6: @node PHC Functions,,, Top
        !             7:
        !             8: */
        !             9: /*&jp-texi
        !            10: @chapter PHC $BH!?t(B
        !            11:
        !            12: $B$3$N@a$G$O(B PHC pack $B$N(B ox $B%5!<%P(B @code{ox_sm1_phc}
        !            13: $B$H$N%$%s%?%U%'!<%94X?t$r2r@b$9$k(B.
        !            14: $B$3$l$i$N4X?t$O%U%!%$%k(B  @file{phc} $B$GDj5A$5$l$F$$$k(B.
        !            15: @code{phc} $B$O(B @file{$(OpenXM_HOME)/lib/asir-contrib} $B$K$"$k(B.
        !            16: */
        !            17: /*&eg-texi
        !            18: @chapter PHC Functions
        !            19:
        !            20: This chapter describes  interface functions for
        !            21: PHC pack ox server @code{ox_sm1_phc}.
        !            22: These interface functions are defined in the file @file{phc}.
        !            23: The file @code{phc} is @*
        !            24: at @file{$(OpenXM_HOME)/lib/asir-contrib}.
        !            25: */
        !            26: /*&C-texi
        !            27: @example
        !            28: @include opening.texi
        !            29: [255] phc.start();
        !            30: 0
        !            31: [257] phc.phc([x^2+y^2-4,x*y-1]);
        !            32: The detailed output is in the file tmp.output.*
        !            33: The answer is in the variable Phc.
        !            34: 0
        !            35: [260] Phc ;
        !            36: [[[-0.517638,0],[-1.93185,0]],
        !            37: [[1.93185,0],[0.517638,0]],
        !            38: [[-1.93185,0],[-0.517638,0]],
        !            39: [[0.517638,0],[1.93185,0]]]
        !            40: [261]
        !            41: @end example
        !            42: */
        !            43: /*&C-texi
        !            44: Author of @code{PHC pack}: Jan Verschelde. @*
        !            45: */
        !            46: /*&jp-texi
        !            47: $B;29M=q(B 1: Jan Verschelde,
        !            48: PHCpack: A general-purpose solver for polynomial systems by
        !            49: homotopy continuation".  ACM Transaction on Mathematical Softwares, 25(2):
        !            50: 251-276, 1999. @*
        !            51: $B;29M=q(B 2: Cox, D., O'Shea, Little, J.,  Using Algebraic Geometry,
        !            52: Springer. Mixed volumes $B$K$D$$$F$N>O$r8+$h(B.
        !            53: */
        !            54: /*&eg-texi
        !            55: Reference 1: Jan Verschelde,
        !            56: PHCpack: A general-purpose solver for polynomial systems by
        !            57: homotopy continuation".  ACM Transaction on Mathematical Softwares, 25(2):
        !            58: 251-276, 1999. @*
        !            59: Reference 2: Cox, D., O'Shea, Little, J.,  Using Algebraic Geometry,
        !            60: Springer. See the chapter on mixed volumes.
        !            61: */
        !            62:
        !            63: /*&C-texi
        !            64: @menu
        !            65: * phc_start::
        !            66: * phc::
        !            67: @end menu
        !            68:
        !            69: */
        !            70: /*&jp-texi
        !            71: @section $BH!?t0lMw(B
        !            72: */
        !            73: /*&eg-texi
        !            74: @section Functions
        !            75: */
        !            76: /*&jp-texi
        !            77: @node phc.start,,, PHC Functions
        !            78: @subsection @code{phc.start}
        !            79: @findex phc.start
        !            80: @table @t
        !            81: @item phc.start()
        !            82: ::  Localhost $B$G(B @code{ox_sm1_phc} $B$r5/F0$9$k(B.
        !            83: @end table
        !            84:
        !            85: @table @var
        !            86: @item return
        !            87: $B@0?t(B
        !            88: @end table
        !            89:
        !            90: @itemize @bullet
        !            91: @item Localhost $B$G(B @code{ox_sm1_phc} $B$r5/F0$9$k(B.
        !            92:     $B5/F0$5$l$?(B @code{ox_sm1_phc} $B$N<1JLHV9f$rLa$9(B.
        !            93: @item @code{Xm_noX =1} $B$H$7$F$*$/$H(B, @code{ox_sm1_phc} $BMQ$N(B debug window $B$,3+$+$J$$(B.
        !            94: @item $B<1JLHV9f$O(B @code{Phc_proc} $B$K3JG<$5$l$k(B.
        !            95: @end itemize
        !            96: */
        !            97: /*&eg-texi
        !            98: @node phc.start,,, PHC Functions
        !            99: @subsection @code{phc.start}
        !           100: @findex phc.start
        !           101: @table @t
        !           102: @item phc.start()
        !           103: ::  Start  @code{ox_sm1_phc} on the localhost.
        !           104: @end table
        !           105:
        !           106: @table @var
        !           107: @item return
        !           108: Integer
        !           109: @end table
        !           110:
        !           111: @itemize @bullet
        !           112: @item Start @code{ox_sm1_phc} on the localhost.
        !           113:     It returns the descriptor of @code{ox_sm1_phc}.
        !           114: @item Set @code{Xm_noX = 1} to start @code{ox_sm1_phc} without a debug window.
        !           115: @item The descriptor is stored in @code{Phc_proc}.
        !           116: @end itemize
        !           117: */
        !           118: /*&C-texi
        !           119: @example
        !           120: P = phc.start()
        !           121: @end example
        !           122: */
        !           123: /*&jp-texi
        !           124: @table @t
        !           125: @item $B;2>H(B
        !           126: @code{ox_launch}, @code{phc}
        !           127: @end table
        !           128: */
        !           129: /*&eg-texi
        !           130: @table @t
        !           131: @item Reference
        !           132: @code{ox_launch}, @code{phc}
        !           133: @end table
        !           134: */
        !           135:
        !           136:
        !           137: /*&jp-texi
        !           138: @node phc.phc,,, PHC Functions
        !           139: @subsection @code{phc.phc}
        !           140: @findex phc.phc
        !           141: @table @t
        !           142: @item phc.phc(@var{s}|proc=@var{p})
        !           143: ::  PHC pack $B$KBe?tJ}Dx<07O(B @var{s} $B$N2r$r$9$Y$F$b$H$a$F$/$l$k$h$&$KMj$`(B.
        !           144: @end table
        !           145:
        !           146: @table @var
        !           147: @item return
        !           148: $B$J$7(B
        !           149: @item p
        !           150: $B?t(B
        !           151: @item s
        !           152: $B%j%9%H(B
        !           153: @end table
        !           154:
        !           155: @itemize @bullet
        !           156: @item
        !           157:    $BBe?tJ}Dx<07O(B @var{S} $B$r%[%b%H%T!<K!$G2r$/$?$a$K(B PHC pack $B$r8F$V(B.
        !           158:     PHC pack $B$r3+H/$7$?$N$O(B Jan Verschelde $B$G$"$k(B.
        !           159:     $B%*%j%8%J%k$NG[I[85$O(B
        !           160:     @code{www.mth.msu.edu/~jan} $B$G$"$k(B.
        !           161:     PHC pack $B$OBe?tJ}Dx<07O$r2r$/$?$a$K$$$m$$$m$J@oN,$r$($i$V$3$H$,$G$-$k$,(B,
        !           162:     $B$3$N%$%s%?%U%'!<%94X?t$G$O(B, black-box solver $B$7$+MQ$$$F$$$J$$(B.
        !           163:     black-box solver $B$O0lHLE*$J@oN,$G$O$"$k$,(B, $BG=N(E*$G$O$J$$(B.
        !           164:     $B$3$N4X?t$GBe?tJ}Dx<0$r2r$/$N$K<:GT$7$?$i(B, $B%*%j%8%J%k$N(B PHC pack $B$rMQ$$(B,
        !           165:     $B$[$+$N@oN,$r;n$7$F$_$k$H$h$$(B.
        !           166: @item
        !           167: PHC $B$O:n6H%U%!%$%k(B @code{tmp.phc.out.pid}, @code{tmp.input.*},
        !           168: @code{tmp.output.*} $B$r@8@.$9$k(B.
        !           169: $B$3$3$G(B @code{pid} $B$O(B @code{ox_sm1_phc} $B$N%W%m%;%9HV9f$G$"$k(B.
        !           170: $B%U%!%$%k(B @code{tmp.output.*} $B$K$O(B PHC pack $B$,$I$N$h$&$KJ}Dx<07O$r2r$$$?$N$+$N(B
        !           171: $B>\$7$$>pJs$,$O$$$C$F$$$k(B.
        !           172: @item
        !           173: $BJQ?t$N?t$HJ}Dx<0$N?t(B @code{length(@var{s})} $B$OEy$7$/$J$$$H$$$1$J$$(B.
        !           174: @end itemize
        !           175: */
        !           176: /*&eg-texi
        !           177: @node phc.phc,,, PHC Functions
        !           178: @subsection @code{phc.phc}
        !           179: @findex phc.phc
        !           180: @table @t
        !           181: @item phc.phc(@var{s}|proc=@var{p})
        !           182: ::  Ask PHC pack to find all the roots in the complex torus of the given systems of polynomials @var{s}
        !           183: @end table
        !           184:
        !           185: @table @var
        !           186: @item return
        !           187: Void
        !           188: @item p
        !           189: Number
        !           190: @item s
        !           191: List
        !           192: @end table
        !           193:
        !           194: @itemize @bullet
        !           195: @item
        !           196:  The server calls PHC pack to solve a system of algebraic equations S
        !           197:     by homotopy methods.
        !           198:     PHC pack has been developed by Jan Verschelde. See
        !           199:     @code{www.mth.msu.edu/~jan} for the original distribution.
        !           200:     The original PHC pack can choose several strategies to solve,
        !           201:     but our phc interface uses only black-box solver, which is general
        !           202:     and automatic but is not efficient. So, if you fails by our interface,
        !           203:     try the other strategies via the original user interface.
        !           204: @item
        !           205: phc generates working files  tmp.phc.out.pid, tmp.input.*, tmp.output.*.
        !           206:     Here, pid the process number of the server.
        !           207:     The file @code{tmp.output.*} contains details informations on how PCH pack
        !           208:     solves the system.
        !           209: @item
        !           210: The number of variables and the number of equations
        !           211: @code{length(@var{s})} must agree.
        !           212: @end itemize
        !           213: */
        !           214: /*&C-texi
        !           215:
        !           216: @noindent
        !           217: Algorithm:
        !           218: Jan Verschelde,
        !           219: PHCpack: A general-purpose solver for polynomial systems by
        !           220: homotopy continuation".  ACM Transaction on Mathematical Softwares, 25(2):
        !           221: 251-276, 1999.
        !           222:
        !           223: @example
        !           224: [232] P = phc.start();
        !           225: 0
        !           226: [233] phc.phc([x^2+y^2-4,x*y-1]|proc=P);
        !           227: The detailed output is in the file tmp.output.*
        !           228: The answer is in the variable Phc.
        !           229: 0
        !           230: [234] Phc;
        !           231: [[[-1.93185,0],[-0.517638,0]],
        !           232:  [[0.517638,0],[1.93185,0]],
        !           233:  [[-0.517638,0],[-1.93185,0]],
        !           234:  [[1.93185,0],[0.517638,0]]]
        !           235:
        !           236:  [[x=[real, imaginary], y=[real,imaginary]],  the first solution
        !           237:   [x=[real, imaginary], y=[real,imaginary]],  the second solution
        !           238:   ...
        !           239: @end example
        !           240: */
        !           241: /*&jp-texi
        !           242: @table @t
        !           243: @item $B;2>H(B
        !           244: @code{ox_launch}, @code{phc.start}, @file{$(OpenXM_HOME)/bin/lin_phcv2}(original PHC pack binary for linux)
        !           245: @end table
        !           246: */
        !           247: /*&eg-texi
        !           248: @table @t
        !           249: @item Reference
        !           250: @code{ox_launch}, @code{phc.start}, @file{$(OpenXM_HOME)/bin/lin_phcv2}(original PHC pack binary for linux)
        !           251: @end table
        !           252: */
        !           253:
        !           254:

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