OpenXM/src/asir-port/cgi/cgi-asir-r-fd2.sh - diff

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Diff for /OpenXM/src/asir-port/cgi/cgi-asir-r-fd2.sh between version 1.2 and 1.6

version 1.2, 2014/09/01 02:41:48

version 1.6, 2015/03/11 07:28:45

Line 1

#!/bin/bash

# $OpenXM: OpenXM/src/asir-port/cgi/cgi-asir-r-fd2.sh,v 1.1 2014/08/31 07:53:57 takayama Exp $

# $OpenXM: OpenXM/src/asir-port/cgi/cgi-asir-r-fd2.sh,v 1.5 2015/02/28 11:39:13 takayama Exp $

## Replace $OpenXM_HOME by an absolute path of your cite and uncomment

#export OpenXM_HOME=/private/taka/OpenXM

export OpenXM_HOME=/private/taka/OpenXM

export HOME=/tmp

## Note that OpenXM_tmp is set in the dot.bashrc below as HOME/.OpenXM_tmp

source $OpenXM_HOME/rc/dot.bashrc

source "$OpenXM_HOME/rc/dot.bashrc"

#source /home/taka/OpenXM/rc/dot.bashrc

export TMP=/tmp

export CGI_ASIR_ALLOW="[(version) (asir_contrib_copyright) (r_ahvec)]"

export CGI_ASIR_ALLOW="[(version) (asir_contrib_copyright) (a_ahvec) (r_ahvec) (a_expect) (r_expect) (r_ahmat) (a_ahmat) (r_log_ahmat) (a_log_ahmat) (util_callfn)]"

export CGI_ASIR_TLIMIT="60"

export OX_ASIR_LOAD_FILE=$OpenXM_HOME/src/asir-port/cgi/r-fd.rr

export OX_ASIR_LOAD_FILE="$OpenXM_HOME/src/asir-port/cgi/r-fd.rr"

export CGI_ASIR_MSG="<pre>

Example. r_ahvec(-1,[-2,-3],10,[[1,1/2,1/3],[1,1,1]])

r_ahvec(A,B,C,P), P is a 2 by m matrix.

Contingency table:

-A, 0, 0, 0

C-1,-B[0],-B[1],-B[2]

It returns (Z, d21 Z, d22 Z, ..., d2m Z).

a_expect(A,B,C,P) or r_expect(A,B,C,P) returns

[E[U_21],E[U_22], ..., E[U_2m]]

BUG: decimal to rational transformation function might not work properly.

Then, double-check the R outputs.

</pre><br>"

WFILE=$TMP/tmp2-post-$$.txt

tee /tmp/t2.txt | oxdecode_post >${WFILE}

$OpenXM_HOME/src/asir-port/cgi/webasir2 --settimer ${CGI_ASIR_TLIMIT} --debug 0 --stdin <${WFILE}

"$OpenXM_HOME/src/asir-port/cgi/webasir2" --settimer ${CGI_ASIR_TLIMIT} --debug 0 --stdin <${WFILE}

rm -f ${WFILE}

exit 0

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