Powered by Apache

CVS log for OpenXM/src/hgm/mh/src/mh.c

[BACK] Up to [local] / OpenXM / src / hgm / mh / src

Request diff between arbitrary revisions


Default branch: MAIN


Revision 1.19 / (download) - annotate - [select for diffs], Tue Mar 1 07:29:18 2016 UTC (8 years, 3 months ago) by takayama
Branch: MAIN
CVS Tags: HEAD
Changes since 1.18: +1 -3 lines
Diff to previous 1.18 (colored)

Change for dp=0 or dp < 0.

Revision 1.18 / (download) - annotate - [select for diffs], Mon Feb 15 07:42:07 2016 UTC (8 years, 4 months ago) by takayama
Branch: MAIN
Changes since 1.17: +3 -3 lines
Diff to previous 1.17 (colored)

Added an explanation on error control of the adaptive Runge-Kutta.
See todo in mh.c on a crash of R by an example in note.txt

Revision 1.17 / (download) - annotate - [select for diffs], Sat Feb 13 06:47:50 2016 UTC (8 years, 4 months ago) by takayama
Branch: MAIN
Changes since 1.16: +2 -2 lines
Diff to previous 1.16 (colored)

The initial version of new R package including 2F1

Revision 1.16 / (download) - annotate - [select for diffs], Sat Feb 13 05:55:09 2016 UTC (8 years, 4 months ago) by takayama
Branch: MAIN
Changes since 1.15: +157 -2 lines
Diff to previous 1.15 (colored)

Added R interface functions.
./mh --testnew is for testing these functions.

Revision 1.15 / (download) - annotate - [select for diffs], Thu Apr 2 01:11:13 2015 UTC (9 years, 2 months ago) by takayama
Branch: MAIN
Changes since 1.14: +6 -3 lines
Diff to previous 1.14 (colored)

Errorneous use of 2^I is corrected.
Debugging functions are defined only when STANDALONE is defined.

Revision 1.14 / (download) - annotate - [select for diffs], Tue Mar 24 05:59:43 2015 UTC (9 years, 2 months ago) by takayama
Branch: MAIN
Changes since 1.13: +17 -17 lines
Diff to previous 1.13 (colored)

printf --> oxprintf
fprintf(stderr, --> oxprintf(

Revision 1.13 / (download) - annotate - [select for diffs], Sun Mar 16 03:11:07 2014 UTC (10 years, 3 months ago) by takayama
Branch: MAIN
CVS Tags: RELEASE_1_3_1_13b
Changes since 1.12: +35 -13 lines
Diff to previous 1.12 (colored)

Options automatic, assigned_series_error, verbose are added to the R-function hgm.pwishart.
See the manual for details.

Revision 1.12 / (download) - annotate - [select for diffs], Fri Mar 8 04:54:01 2013 UTC (11 years, 3 months ago) by takayama
Branch: MAIN
Changes since 1.11: +26 -6 lines
Diff to previous 1.11 (colored)

New options: --strategy n --abserr e1 --relerr e2
 If n==0, then the 4th Runge-Kutta is used.
If n==1, then the adaptive 4th Runge-Kutta is used where e1 is the absolute error and e2 is the relative error
to control the step size.

Revision 1.11 / (download) - annotate - [select for diffs], Thu Mar 7 07:02:18 2013 UTC (11 years, 3 months ago) by takayama
Branch: MAIN
Changes since 1.10: +2 -2 lines
Diff to previous 1.10 (colored)

The gls adaptive Runge-Kutta is used (cf. NO_GSL).
Relative error bound should be used.

Revision 1.10 / (download) - annotate - [select for diffs], Thu Mar 7 05:23:31 2013 UTC (11 years, 3 months ago) by takayama
Branch: MAIN
Changes since 1.9: +2 -2 lines
Diff to previous 1.9 (colored)

Minor changes to remove warnings by the option -std=gnu99.

Revision 1.9 / (download) - annotate - [select for diffs], Thu Mar 7 03:00:43 2013 UTC (11 years, 3 months ago) by takayama
Branch: MAIN
Changes since 1.8: +4 -4 lines
Diff to previous 1.8 (colored)

Cosmetic changes: indent-region and untabify.

Revision 1.8 / (download) - annotate - [select for diffs], Tue Mar 5 07:03:37 2013 UTC (11 years, 3 months ago) by takayama
Branch: MAIN
Changes since 1.7: +1 -2 lines
Diff to previous 1.7 (colored)

When mode=c(1,1,d), cwishart returns an array of the length d+rank+1.
The returned values are intermediate values of cwishart().
Example: matrix(cwishart(mode=(1,1,100)), ncol=8+1,byrow=1).

Revision 1.7 / (download) - annotate - [select for diffs], Tue Mar 5 06:35:54 2013 UTC (11 years, 3 months ago) by takayama
Branch: MAIN
Changes since 1.6: +11 -1 lines
Diff to previous 1.6 (colored)

Added a test code to read output data.

Revision 1.6 / (download) - annotate - [select for diffs], Tue Mar 5 06:00:52 2013 UTC (11 years, 3 months ago) by takayama
Branch: MAIN
Changes since 1.5: +12 -5 lines
Diff to previous 1.5 (colored)

cwishart() accepts the optional variable mode=c(ke,rk,intermediate).
If it is c(1,0,0), then the only Koev-Edelman algorithm is executed and
the cwishart is evaluated at x0 (NOT x).
The default is c(1,1,0).

Revision 1.5 / (download) - annotate - [select for diffs], Mon Feb 25 12:11:23 2013 UTC (11 years, 3 months ago) by takayama
Branch: MAIN
Changes since 1.4: +9 -4 lines
Diff to previous 1.4 (colored)

The bug #ticket-2013-02-25-a# (memory leak) is fixed.

Revision 1.4 / (download) - annotate - [select for diffs], Sun Feb 24 21:36:49 2013 UTC (11 years, 3 months ago) by takayama
Branch: MAIN
Changes since 1.3: +8 -7 lines
Diff to previous 1.3 (colored)

Debugging a memory leak caused when main() is executed in mh.c.
It is still under progress. #ticket 2013-02-25-a#

Revision 1.3 / (download) - annotate - [select for diffs], Sat Feb 23 07:00:21 2013 UTC (11 years, 3 months ago) by takayama
Branch: MAIN
Changes since 1.2: +4 -5 lines
Diff to previous 1.2 (colored)

hgm.cwishart of computing the cumulative distribution function of random wishart matrix
is implemented as an R function. #milestone 2013-02-23-a#.
We need several small changes and adjustments to complete this project.

Revision 1.2 / (download) - annotate - [select for diffs], Sat Feb 23 06:01:53 2013 UTC (11 years, 3 months ago) by takayama
Branch: MAIN
Changes since 1.1: +1 -0 lines
Diff to previous 1.1 (colored)

Added the tag OpenXM.

Revision 1.1 / (download) - annotate - [select for diffs], Sat Feb 23 06:01:15 2013 UTC (11 years, 3 months ago) by takayama
Branch: MAIN

mh_cwishart_hgm() evaluates the cumulative distribution function
of the first eigenvalue of wishart matrix by Koev-Edelman alg
and HGM.
See main and main1 in mh.c as an example of the usage.

This form allows you to request diff's between any two revisions of a file. You may select a symbolic revision name using the selection box or you may type in a numeric name using the type-in text box.




FreeBSD-CVSweb <freebsd-cvsweb@FreeBSD.org>