CVS log for OpenXM/src/hgm/mh/src/mh.h

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Default branch: MAIN

Revision 1.13 / (download) - annotate - [select for diffs], Sat Feb 13 05:55:09 2016 UTC (8 years, 4 months ago) by takayama
Branch: MAIN
CVS Tags: HEAD
Changes since 1.12: +9 -1 lines
Diff to previous 1.12 (colored)

Added R interface functions.
./mh --testnew is for testing these functions.

Revision 1.12 / (download) - annotate - [select for diffs], Sat Feb 13 02:18:59 2016 UTC (8 years, 4 months ago) by takayama
Branch: MAIN
Changes since 1.11: +8 -2 lines
Diff to previous 1.11 (colored)

Both of code-n.c (for 1F1) and code-n-2f1.c (for 2F1) are included in hgm_w-n
New input data format is installed.

Revision 1.11 / (download) - annotate - [select for diffs], Tue Mar 24 05:59:43 2015 UTC (9 years, 3 months ago) by takayama
Branch: MAIN
Changes since 1.10: +2 -1 lines
Diff to previous 1.10 (colored)

printf --> oxprintf
fprintf(stderr, --> oxprintf(

Revision 1.10 / (download) - annotate - [select for diffs], Mon Mar 17 02:49:39 2014 UTC (10 years, 3 months ago) by takayama
Branch: MAIN
CVS Tags: RELEASE_1_3_1_13b
Changes since 1.9: +3 -3 lines
Diff to previous 1.9 (colored)

Changed default values of parameters.
automatic=1
x0value_min=1e-60
SIGDIGIT_DEFAULT depends on ASSIGNED_SERIES_ERROR_DEFAULT.
Mapprox >= M_n (number of variables).

Added an example used in the paper (m=10).

Revision 1.9 / (download) - annotate - [select for diffs], Sun Mar 16 03:11:07 2014 UTC (10 years, 3 months ago) by takayama
Branch: MAIN
Changes since 1.8: +10 -4 lines
Diff to previous 1.8 (colored)

Options automatic, assigned_series_error, verbose are added to the R-function hgm.pwishart.
See the manual for details.

Revision 1.8 / (download) - annotate - [select for diffs], Sat Mar 15 00:43:47 2014 UTC (10 years, 3 months ago) by takayama
Branch: MAIN
Changes since 1.7: +4 -2 lines
Diff to previous 1.7 (colored)

A parser of idata is added.
strategy=1 is the default.
x0value_min is changed to 1e-30.
Output several diagnostic data (estimated step size, ...)

Revision 1.7 / (download) - annotate - [select for diffs], Fri Mar 8 04:54:01 2013 UTC (11 years, 3 months ago) by takayama
Branch: MAIN
Changes since 1.6: +4 -1 lines
Diff to previous 1.6 (colored)

New options: --strategy n --abserr e1 --relerr e2
 If n==0, then the 4th Runge-Kutta is used.
If n==1, then the adaptive 4th Runge-Kutta is used where e1 is the absolute error and e2 is the relative error
to control the step size.

Revision 1.6 / (download) - annotate - [select for diffs], Thu Mar 7 05:23:31 2013 UTC (11 years, 3 months ago) by takayama
Branch: MAIN
Changes since 1.5: +5 -1 lines
Diff to previous 1.5 (colored)

Minor changes to remove warnings by the option -std=gnu99.

Revision 1.5 / (download) - annotate - [select for diffs], Thu Mar 7 03:00:43 2013 UTC (11 years, 3 months ago) by takayama
Branch: MAIN
Changes since 1.4: +4 -4 lines
Diff to previous 1.4 (colored)

Cosmetic changes: indent-region and untabify.

Revision 1.4 / (download) - annotate - [select for diffs], Tue Mar 5 06:00:52 2013 UTC (11 years, 3 months ago) by takayama
Branch: MAIN
Changes since 1.3: +2 -2 lines
Diff to previous 1.3 (colored)

cwishart() accepts the optional variable mode=c(ke,rk,intermediate).
If it is c(1,0,0), then the only Koev-Edelman algorithm is executed and
the cwishart is evaluated at x0 (NOT x).
The default is c(1,1,0).

Revision 1.3 / (download) - annotate - [select for diffs], Sat Feb 23 07:00:21 2013 UTC (11 years, 4 months ago) by takayama
Branch: MAIN
Changes since 1.2: +3 -1 lines
Diff to previous 1.2 (colored)

hgm.cwishart of computing the cumulative distribution function of random wishart matrix
is implemented as an R function. #milestone 2013-02-23-a#.
We need several small changes and adjustments to complete this project.

Revision 1.2 / (download) - annotate - [select for diffs], Sat Feb 23 06:01:53 2013 UTC (11 years, 4 months ago) by takayama
Branch: MAIN
Changes since 1.1: +1 -0 lines
Diff to previous 1.1 (colored)

Added the tag OpenXM.

Revision 1.1 / (download) - annotate - [select for diffs], Sat Feb 23 06:01:15 2013 UTC (11 years, 4 months ago) by takayama
Branch: MAIN

mh_cwishart_hgm() evaluates the cumulative distribution function
of the first eigenvalue of wishart matrix by Koev-Edelman alg
and HGM.
See main and main1 in mh.c as an example of the usage.

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