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Diff for /OpenXM/src/hgm/mh/src/wmain.c between version 1.10 and 1.16

version 1.10, 2013/03/07 03:00:43 version 1.16, 2014/03/11 05:20:45
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 /*  /*
   $OpenXM: OpenXM/src/hgm/mh/src/wmain.c,v 1.9 2013/03/05 05:26:07 takayama Exp $    $OpenXM: OpenXM/src/hgm/mh/src/wmain.c,v 1.15 2014/03/10 04:38:23 takayama Exp $
   License: LGPL    License: LGPL
 */  */
 #include <stdio.h>  #include <stdio.h>
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 #include <math.h>  #include <math.h>
 #include <string.h>  #include <string.h>
 #include "sfile.h"  #include "sfile.h"
   #include "mh.h"
 #define SMAX 4096  #define SMAX 4096
 #define inci(i) { i++; if (i >= argc) { fprintf(stderr,"Option argument is not given.\n"); return(NULL); }}  #define inci(i) { i++; if (i >= argc) { fprintf(stderr,"Option argument is not given.\n"); return(NULL); }}
 int MH_deallocate=0;  int MH_deallocate=0;
Line 32  int MH_RawName = 0;
Line 33  int MH_RawName = 0;
 static int Testrank=0;  static int Testrank=0;
 extern int MH_Verbose;  extern int MH_Verbose;
   
   
 extern int MH_P95;  /* 95 % points */  extern int MH_P95;  /* 95 % points */
 int mh_gopen_file(void);  int mh_gopen_file(void);
 static int setParamTest(void);  static int setParamTest(void);
Line 64  static int mypower(int x,int n) {
Line 66  static int mypower(int x,int n) {
 }  }
 #ifdef STANDALONE2  #ifdef STANDALONE2
 main(int argc,char *argv[]) {  main(int argc,char *argv[]) {
     int strategy=STRATEGY_DEFAULT;
     double err[2]={-1.0,-1.0};
     int i;
     for (i=1; i<argc; i++) {
       if (strcmp(argv[i],"--strategy")==0) {
         i++; sscanf(argv[i],"%d",&strategy);
       }else if (strcmp(argv[i],"--abserr")==0) {
         i++; sscanf(argv[i],"%lg",&(err[0]));
       }else if (strcmp(argv[i],"--relerr")==0) {
         i++; sscanf(argv[i],"%lg",&(err[1]));
       }else ;
     }
     mh_set_strategy(strategy,err);
   mh_exit(MH_RESET_EXIT); /* standalone mode */    mh_exit(MH_RESET_EXIT); /* standalone mode */
   /*  mh_main(argc,argv);    /*  mh_main(argc,argv);
       mh_freeWorkArea(); */        mh_freeWorkArea(); */
   mh_main(argc,argv);    mh_main(argc,argv);
     /* showParam(); */
 }  }
 #endif  #endif
 struct MH_RESULT *mh_main(int argc,char *argv[]) {  struct MH_RESULT *mh_main(int argc,char *argv[]) {
   static double *y0;    static double *y0=NULL;
   double x0,xn;    double x0,xn;
   double ef;    double ef;
   int i,rank;    int i,rank;
Line 113  struct MH_RESULT *mh_main(int argc,char *argv[]) {
Line 129  struct MH_RESULT *mh_main(int argc,char *argv[]) {
       MH_Verbose=1;        MH_Verbose=1;
     }else if (strcmp(argv[i],"--bystring")==0) {      }else if (strcmp(argv[i],"--bystring")==0) {
       MH_byFile = 0;        MH_byFile = 0;
           }else if (strcmp(argv[i],"--strategy")==0) {
             i++; /* ignore */
           }else if (strcmp(argv[i],"--abserr")==0) {
             i++; /* ignore */
           }else if (strcmp(argv[i],"--relerr")==0) {
             i++; /* ignore */
     }else {      }else {
       fprintf(stderr,"Unknown option %s\n",argv[i]);        fprintf(stderr,"Unknown option %s\n",argv[i]);
       mh_usage();        mh_usage();
Line 129  struct MH_RESULT *mh_main(int argc,char *argv[]) {
Line 151  struct MH_RESULT *mh_main(int argc,char *argv[]) {
   mh_gopen_file();    mh_gopen_file();
   if (MH_Verbose) {for (i=0; i<rank; i++) printf("%lf\n",y0[i]); }    if (MH_Verbose) {for (i=0; i<rank; i++) printf("%lf\n",y0[i]); }
   rp = (struct MH_RESULT*) mh_malloc(sizeof(struct MH_RESULT));    rp = (struct MH_RESULT*) mh_malloc(sizeof(struct MH_RESULT));
     rp->message = NULL;
   *rp=mh_rkmain(x0,y0,xn);    *rp=mh_rkmain(x0,y0,xn);
   return(rp);    return(rp);
 }  }
   
 int mh_usage() {  int mh_usage() {
   fprintf(stderr,"Usages:\n");    fprintf(stderr,"Usages:\n");
   fprintf(stderr,"w-m [--idata input_data_file --gnuplotf gnuplot_file_name\n");    fprintf(stderr,"hgm_w-n [--idata input_data_file --gnuplotf gnuplot_file_name\n");
   fprintf(stderr," --dataf output_data_file --raw --xmax xmax --test m --step h]\n");    fprintf(stderr," --dataf output_data_file --raw --xmax xmax --test m --step h]\n");
   fprintf(stderr,"[ --95 --verbose] \n");    fprintf(stderr,"[ --95 --verbose] \n");
   fprintf(stderr,"--raw does not add data parameters to the output_data_file.\n");    fprintf(stderr,"--raw does not add data parameters to the output_data_file.\n");
   fprintf(stderr,"\nThe command w-m [options] evaluates Pr({y | y<xmax}), which is the cumulative distribution function of the largest root of the m by m Wishart matrix with n degrees of freedom and the covariantce matrix sigma.\n");    fprintf(stderr,"\nThe command hgm_w-n [options] evaluates Pr({y | y<xmax}), which is the cumulative distribution function of the largest root of the m by m Wishart matrix with n degrees of freedom and the covariantce matrix sigma.\n");
   fprintf(stderr,"All the eigenvalues of sigma must be simple.\n");    fprintf(stderr,"All the eigenvalues of sigma must be simple.\n");
   fprintf(stderr,"Parameters are specified by the input_data_file.\n");    fprintf(stderr,"Parameters are specified by the input_data_file.\n");
   fprintf(stderr,"The format of the input_data_file.\n");    fprintf(stderr,"The format of the input_data_file, which should be generated by the command hgm_jack-n.\n");
   fprintf(stderr," MH_Mg: m, MH_Beta: beta=sigma^(-1)/2 (diagonized), MH_Ng: n, Iv: initial values at MH_X0g*MH_Beta (see our paper how to order them), \n");    fprintf(stderr," MH_Mg: m, MH_Beta: beta=sigma^(-1)/2 (diagonized), MH_Ng: n, MH_X0g: starting value of x,\n");
     fprintf(stderr," Iv: initial values at MH_X0g*MH_Beta (see our paper how to order them), \n");
   fprintf(stderr," Ef: a scalar factor to the initial value. It may set to 1.\n");    fprintf(stderr," Ef: a scalar factor to the initial value. It may set to 1.\n");
   fprintf(stderr," MH_Hg: h (step size), MH_X0g: starting value of x, Xng: terminating value of x\n");    fprintf(stderr," MH_Hg: h (step size),\n");
   fprintf(stderr," MH_Dp: output data is stored in every MH_Dp steps when output_data_file is specified.\n");    fprintf(stderr," MH_Dp: output data is stored in every MH_Dp steps when output_data_file is specified.\n");
     fprintf(stderr," Xng: terminating value of x.\n");
   fprintf(stderr," --95: output the 95%% point. --verbose: verbose mode.\n");    fprintf(stderr," --95: output the 95%% point. --verbose: verbose mode.\n");
   fprintf(stderr," The line started with %% is a comment line.\n");    fprintf(stderr," The line started with %% is a comment line.\n");
   fprintf(stderr," An example format of the input_data_file can be obtained by executing w-2 with no option.\n");    fprintf(stderr," An example format of the input_data_file can be obtained by executing hgm_jack-n with no option.\n");
     fprintf(stderr,"When --idata option is used, this command is quiet. Use --verbose option if you want to see some messages.\n");
   fprintf(stderr,"\nExamples:\n");    fprintf(stderr,"\nExamples:\n");
   fprintf(stderr,"[1] ./w-2 \n");    fprintf(stderr,"[1] ./hgm_w-n \n");
   fprintf(stderr,"[2] ./w-2 --xmax 20\n");    fprintf(stderr,"[2] ./hgm_w-n --xmax 20\n");
   fprintf(stderr,"[3] ./w-6 --test 6\n");    fprintf(stderr,"[3] ./hgm_w-n --test 6\n");
   fprintf(stderr,"   A test run of w-6.\n");    fprintf(stderr,"   A test run in Mg=6.\n");
   fprintf(stderr,"   The number m and mm must agree for  ./w-m --test mm.\n");    fprintf(stderr,"[4] ./hgm_jack-n --idata Testdata/tmp-idata3.txt --degree 15 >t.txt\n");
   fprintf(stderr,"[4] ./w-5 --idata tmp-inm-m5* --gnuplot tmp-graph\n");    fprintf(stderr,"    ./hgm_w-n --idata t.txt --gnuplotf test-g\n");
   fprintf(stderr,"  tmp-inm-m5* is a sample input data distributed with this file.\n");    fprintf(stderr,"    gnuplot -persist <test-g-gp.txt\n");
   fprintf(stderr,"  tmp-graph-gp.txt is an input file of the gnuplot\n");    fprintf(stderr,"  tmp-idata3.txt is a sample input data distributed with this file.\n");
   fprintf(stderr,"  It can be executed with the load command in the gnuplot.\n");    fprintf(stderr,"  test-g-gp.txt is an input file of the gnuplot\n");
   fprintf(stderr,"  tmp-graph is the table of x and the values of Pr({y | y<x}).\n");    fprintf(stderr,"  test-g is the table of x and the values of Pr({y | y<x}).\n");
 }  }
   
 static int setParamTest() {  static int setParamTest() {
Line 270  static int setParam(char *fname) {
Line 296  static int setParam(char *fname) {
   
 int showParam() {  int showParam() {
   int rank,i;    int rank,i;
     extern int MH_strategy;
     extern double MH_abserr;
     extern double MH_relerr;
   rank = mypower(2,MH_Mg);    rank = mypower(2,MH_Mg);
   printf("%%MH_Mg=\n%d\n",MH_Mg);    printf("%%MH_Mg=\n%d\n",MH_Mg);
   for (i=0; i<MH_Mg; i++) {    for (i=0; i<MH_Mg; i++) {
Line 284  int showParam() {
Line 313  int showParam() {
   printf("%%MH_Hg=\n%lf\n",MH_Hg);    printf("%%MH_Hg=\n%lf\n",MH_Hg);
   printf("%%MH_Dp=\n%d\n",MH_Dp);    printf("%%MH_Dp=\n%d\n",MH_Dp);
   printf("%%Xng=\n%lf\n",Xng);    printf("%%Xng=\n%lf\n",Xng);
     printf("%%strategy=%d\n",MH_strategy);
     printf("%%abserr=%lg, relerr=%lg\n",MH_abserr,MH_relerr);
 }  }
   
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