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Diff for /OpenXM/src/tigers/tigers.patch between version 1.1 and 1.4

version 1.1, 2000/01/07 22:53:42 version 1.4, 2014/03/29 20:02:25
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   diff -urN TiGERS_0.9.orig/Makefile TiGERS_0.9/Makefile
   --- TiGERS_0.9.orig/Makefile    1999-06-12 07:05:52.000000000 +0900
   +++ TiGERS_0.9/Makefile 2014-03-30 04:58:05.000000000 +0900
   @@ -2,7 +2,7 @@
   
    # specify compiler and compiler flags
    # note to use profiling need -pg option for both compiling and linking
   -CC = gcc
   +#CC = gcc
    CFLAGS = -O3
   
    Lib_Dirs =
 diff -urN TiGERS_0.9.orig/NOTE.txt TiGERS_0.9/NOTE.txt  diff -urN TiGERS_0.9.orig/NOTE.txt TiGERS_0.9/NOTE.txt
 --- TiGERS_0.9.orig/NOTE.txt    Thu Jan  1 09:00:00 1970  --- TiGERS_0.9.orig/NOTE.txt    Thu Jan  1 09:00:00 1970
 +++ TiGERS_0.9/NOTE.txt Sat Jan  8 07:43:41 2000  +++ TiGERS_0.9/NOTE.txt Sat Jan  8 07:43:41 2000
Line 94  diff -urN TiGERS_0.9.orig/binomial.c TiGERS_0.9/binomi
Line 106  diff -urN TiGERS_0.9.orig/binomial.c TiGERS_0.9/binomi
   
  /*   /*
 diff -urN TiGERS_0.9.orig/call.c TiGERS_0.9/call.c  diff -urN TiGERS_0.9.orig/call.c TiGERS_0.9/call.c
 --- TiGERS_0.9.orig/call.c      Sat Jan  8 07:42:43 2000  --- TiGERS_0.9.orig/call.c      Sat Jun 12 07:05:52 1999
 +++ TiGERS_0.9/call.c   Sat Jan  8 07:43:41 2000  +++ TiGERS_0.9/call.c   Wed Dec 15 03:06:28 2004
 @@ -15,6 +15,8 @@  @@ -15,6 +15,8 @@
  #include "gset.h"   #include "gset.h"
  #include "matrices.h"   #include "matrices.h"
Line 105  diff -urN TiGERS_0.9.orig/call.c TiGERS_0.9/call.c
Line 117  diff -urN TiGERS_0.9.orig/call.c TiGERS_0.9/call.c
  /*   /*
  ** write a description of program usage to stderr   ** write a description of program usage to stderr
  */   */
   @@ -68,7 +70,7 @@
      exit(-1);
    }
   
   -FILE *infile=stdin, *outfile=stdout;
   +FILE *infile, *outfile;
    extern int rsearch_cache;
    extern int print_tree;
    extern int  print_init;
 @@ -87,7 +89,7 @@  @@ -87,7 +89,7 @@
   
  #define MATFOUND 1   #define MATFOUND 1
Line 114  diff -urN TiGERS_0.9.orig/call.c TiGERS_0.9/call.c
Line 135  diff -urN TiGERS_0.9.orig/call.c TiGERS_0.9/call.c
   char *c,cc, *prog=argv[0], *ifname=0, *ofname=0;    char *c,cc, *prog=argv[0], *ifname=0, *ofname=0;
   int tmp,acnt,stat=0,counter;    int tmp,acnt,stat=0,counter;
   gset G1=0,gset_toric_ideal();    gset G1=0,gset_toric_ideal();
 @@ -205,6 +207,29 @@  @@ -100,6 +102,10 @@
      print_tree=FALSE;
      print_init=FALSE;
   
   +  /* added by noro */
   +  infile = stdin;
   +  outfile = stdout;
   +
      /* parse command line */
      while (--argc > 0 && (*++argv)[0] == '-'){
        acnt=0;
   @@ -205,6 +211,29 @@
     }      }
    }     }
   
Line 144  diff -urN TiGERS_0.9.orig/call.c TiGERS_0.9/call.c
Line 176  diff -urN TiGERS_0.9.orig/call.c TiGERS_0.9/call.c
    /* output first GB if desired */     /* output first GB if desired */
    fprintf(outfile,"%% starting GB:\n");     fprintf(outfile,"%% starting GB:\n");
    fprintf(outfile,"R: %d\n",ring_N);     fprintf(outfile,"R: %d\n",ring_N);
 @@ -314,15 +339,119 @@  @@ -314,15 +343,119 @@
      return 0;       return 0;
      }       }
    }     }
Line 203  diff -urN TiGERS_0.9.orig/call.c TiGERS_0.9/call.c
Line 235  diff -urN TiGERS_0.9.orig/call.c TiGERS_0.9/call.c
 +  +
 +  return M;  +  return M;
 +}  +}
   +
 +tiger_executeString_M(char *is) {  +tiger_executeString_M(char *is) {
 +  char *c,cc, *prog="tigers", *ifname=0, *ofname=0;  +  char *c,cc, *prog="tigers", *ifname=0, *ofname=0;
 +  int tmp,acnt,stat=0,counter;  +  int tmp,acnt,stat=0,counter;
 +  gset G1=0,gset_toric_ideal();  +  gset G1=0,gset_toric_ideal();
 +  int **M=0,Mn,Mm;  +  int **M=0,Mn,Mm;
 +  double tt;  +  double tt;
   +
 +  /* initialize parameters */  +  /* initialize parameters */
 +  root_only=FALSE;  +  root_only=FALSE;
 +  rsearch_cache=TRUE;  +  rsearch_cache=TRUE;
 +  print_tree=FALSE;  +  print_tree=FALSE;
 +  print_init=FALSE;  +  print_init=FALSE;
   +
 +  if ((M=imatrix_read_from_string(is,&Mm,&Mn))==0){  +  if ((M=imatrix_read_from_string(is,&Mm,&Mn))==0){
 +     fprintf(stderr,"%s: imatrix_read() failed\n",prog);  +     fprintf(stderr,"%s: imatrix_read() failed\n",prog);
 +     exit(1);  +     exit(1);
Line 250  diff -urN TiGERS_0.9.orig/call.c TiGERS_0.9/call.c
Line 282  diff -urN TiGERS_0.9.orig/call.c TiGERS_0.9/call.c
 +      fprintf(outfile,"\n");  +      fprintf(outfile,"\n");
 +    }  +    }
 +  }  +  }
 +  
 +  fprintf(outfile,"]\n");  +  fprintf(outfile,"]\n");
 +  LP_free_space();  +  LP_free_space();
 +  if (G1!=0) gset_free(G1);  +  if (G1!=0) gset_free(G1);
 +}  +}
 +  
 +  
 +main(int argc, char *argv[]) {  +main(int argc, char *argv[]) { infile=stdin; outfile=stdout;
 +  if (argc > 1) {  +  if (argc > 1) {
 +    tiger_executeString_M(argv[1]);  +    tiger_executeString_M(argv[1]);
 +  }else{  +  }else{
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