Annotation of OpenXM_contrib/pari-2.2/doc/appa.tex, Revision 1.1.1.1
1.1 noro 1: % $Id: appa.tex,v 1.14 2001/09/19 21:47:15 karim Exp $
2: % Copyright (c) 2000 The PARI Group
3: %
4: % This file is part of the PARI/GP documentation
5: %
6: % Permission is granted to copy, distribute and/or modify this document
7: % under the terms of the GNU Free Documentation License
8: \appendix{Installation Guide for the UNIX Versions}
9:
10: \def\tocwrite#1{}
11: \section{Required tools}
12:
13: We assume that you have either an \kbd{ANSI C} or a \kbd{C++} compiler
14: available. If your machine does not have one (for example if you still use
15: \kbd{/bin/cc} in \kbd{SunOS 4.1.x}), we strongly suggest that you obtain the
16: \kbd{gcc/g++} compiler from the Free Software Foundation or by
17: anonymous~\kbd{ftp}. As for all GNU software mentioned afterwards, you can
18: find the most convenient site to fetch \kbd{gcc} at the address
19:
20: \kbd{http://www.gnu.ai.mit.edu/order/ftp.html}
21:
22: \noindent
23: You can certainly compile PARI with a different compiler, but the PARI
24: kernel takes advantage of some optimizations provided by \kbd{gcc} if it is
25: available. This results in about 20\% speedup on most architectures%
26: \footnote*{One notable exception is the native AIX C compiler on IBM
27: RS/6000 workstations, which generates fast code even without any special
28: help from the PARI kernel sources.}.
29:
30: \subsec{Optional packages:} The following programs and libraries are useful
31: in conjunction with GP, but not mandatory. They're probably already installed
32: somewhere on your system (with the possible exception of \kbd{readline},
33: which we think is really worth a try). In any case, get them before
34: proceeding if you want the functionalities they provide. All of them are free
35: (though you ought to make a small donation to the FSF if you use (and like)
36: GNU wares).
37:
38: $\bullet$ GNU \kbd{readline} library. This provides line editing under GP,
39: an automatic context-dependent completion, and an editable history of
40: commands. Note that it is incompatible with SUN commandtools (yet another
41: reason to dump Suntools for X Windows). A recent readline (version number at
42: least 2.2) is preferred, but older versions should be usable.
43:
44: $\bullet$ GNU \kbd{gzip/gunzip/gzcat} package enables GP to read
45: compressed data.
46:
47: $\bullet$ GNU \kbd{emacs}. GP can be run in an Emacs buffer, with all the
48: obvious advantages if you are familiar with this editor. Note that
49: \kbd{readline} is still useful in this case since it provides a much better
50: automatic completion than is provided by Emacs GP-mode.
51:
52: $\bullet$ \kbd{perl} provides extended online help (full text from this
53: manual) about functions and concepts, which can be used under GP or
54: independently (\kbd{http://www.perl.com} will direct you to the nearest
55: \kbd{CPAN} archive site).
56:
57: $\bullet$ A colour-capable \kbd{xterm}, which enables GP to use different
58: (user configurable) colours for its output. All \kbd{xterm} programs which come
59: with current X11R6.3 distributions will satisfy this requirement. Under X11R6,
60: you can for instance use \kbd{color\_xterm} (get the latest version at
61: \kbd{http://www.clark.net/pub/dickey/xterm}).
62:
63: \vfill\eject
64: \section{Compiling the library and the GP calculator}
65:
66: \subsec{Basic configuration:} First, have a look at the \kbd{MACHINES} file
67: to see if anything funny applies to your architecture or operating system.
68: Then, type
69:
70: \kbd{./Configure}
71:
72: \noindent in the toplevel directory. This will attempt to configure GP/PARI
73: without outside help. Note that if you want to install the end product in
74: some nonstandard place, you can use the \kbd{--prefix} option, as in
75:
76: \kbd{./Configure --prefix=/an/exotic/directory}
77:
78: \noindent (the default prefix is \kbd{/usr/local}). This phase extracts some
79: files and creates a directory \kbd{O$xxx$} where the object files and
80: executables will be built. The $xxx$ part depends on your architecture and
81: operating system, thus you can build GP for several different machines from
82: the same source tree (the builds are completely independent, so can be done
83: simultaneously).
84:
85: \misctitle{Technical note:} The precise default destinations are as follows:
86: the \kbd{gp} binary, the scripts \kbd{gphelp} and \kbd{tex2mail} go to
87: \kbd{\$prefix/bin}. The pari library goes to \kbd{\$prefix/lib} and include
88: files to \kbd{\$prefix/include/pari}. As for architecture independant files,
89: the man pages go into \kbd{\$prefix/man} and the rest in various
90: subdirectories of \kbd{\$prefix/lib/pari}.
91:
92: \noindent You can also supply a \kbd{--share-prefix} argument in which case
93: architecture independant files go to different directories than in the above
94: scheme: \kbd{\$share/pari} (galdata package), \kbd{\$share/man} (man pages)
95: and \kbd{\$share/doc/pari/} (everything else: sample GP scripts and C code,
96: documentation, emacs macros). For instance, to build a package for a Linux
97: distribution, you will want to use
98:
99: \kbd{./Configure --prefix=/usr --share-prefix=/usr/share}
100:
101: \noindent \kbd{Configure} will let the following environment variable
102: override the defaults if set:
103:
104: \kbd{AS}: Assembler.
105:
106: \kbd{CC}: C compiler.
107:
108: \kbd{CFLAGS}: Flags for the C compiler.
109:
110: \kbd{DLLD}: Dynamic library linker.
111:
112: \noindent For instance, \kbd{Configure} avoids \kbd{gcc} on some
113: architectures due to various problems which may have been fixed in your
114: version of the compiler. You can try
115:
116: \kbd{env CC=gcc Configure}
117:
118: \noindent and compare the benches. Also, if you insist on using a \kbd{C++}
119: compiler and run into trouble with a recent \kbd{g++}, try to use
120: \kbd{g++ -fpermissive}.
121:
122: \subsec{Troubleshooting and fine tuning:} Decide whether you agree with what
123: \kbd{Configure} printed on your screen (in particular the architecture,
124: compiler and optimization flags). If anything should have been found and was
125: not, consider that \kbd{Configure} failed and follow the instructions below.
126: Look especially for the \kbd{readline} and \kbd{X11} libraries, and the
127: \kbd{perl} and \kbd{gunzip} (or \kbd{zcat}) binaries.
128:
129: In case the default \kbd{Configure} run fails miserably, try
130:
131: \kbd{./Configure -a}
132:
133: \noindent (interactive mode) and answer all the questions (there aren't that
134: many). Of course, \kbd{Configure} will still provide defaults for each answer
135: but if you accept them all, it will fail just the same, so be wary. In any
136: case, we would appreciate a bug report including the complete output from
137: \kbd{Configure} and the file \kbd{O$xxx$/dft.Config.in} that was produced in
138: the process.
139:
140: Note that even in interactive mode, you can't directly tell \kbd{Configure}
141: where the \kbd{readline} library and include files are. If they are not in a
142: standard place, it won't find them. Nonetheless, it first searches the
143: distribution toplevel for a \kbd{readline} directory. Thus, if you just want
144: to give \kbd{readline} a try (as you probably should), you can get the source
145: and compile it there (you don't need to install it). You can also use this
146: feature together with a symbolic link, named \kbd{readline}, in the PARI
147: toplevel directory if you have compiled the readline library somewhere else,
148: without installing it to one of its standard locations.
149:
150: \misctitle{Technical note:} Configure can build GP on different architectures
151: simultaneously from the same toplevel sources. Instead of the \kbd{readline}
152: link alluded above, you can create \kbd{readline-{\sl osname}-{\sl arch}},
153: using the same naming conventions as for the \kbd{O$xxx$} directory,
154: e.g \kbd{readline-linux-i686}.
155:
156: \subsec{Debugging/profiling}: If you also want to debug the PARI library,
157:
158: \kbd{Configure -g}
159:
160: \noindent will create a directory \kbd{O$xxx$.dbg} containing a special
161: \kbd{Makefile} ensuring that the GP and PARI library built there will be
162: suitable for debugging (if your compiler doesn't use standard flags,
163: e.g.~\kbd{-g} you may have to tweak that \kbd{Makefile}). If you want to
164: profile GP or the library (using \kbd{gprof} for instance),
165:
166: \kbd{Configure -pg}
167:
168: \noindent will create an \kbd{O$xxx$.prf} directory where a suitable version
169: of PARI can be built.
170:
171: \subsec{Compilation and tests:} To compile the GP binary, simply type
172:
173: \kbd{make gp}
174:
175: \noindent in the distribution directory. If your \kbd{make} program supports
176: parallel make, you can speed up the process by going to the \kbd{O$xxx$}
177: directory that \kbd{Configure} created and doing a parallel make here (for
178: instance \kbd{make -j4} with GNU make).
179:
180: \subsubsec{Testing}
181:
182: To test the binary, type \kbd{make bench}. This will build a static
183: executable (the default, built by \kbd{make gp} is probably dynamic) and
184: run a series of comparative tests on those two. To test only the default
185: binary, use \kbd{make dobench} which starts the bench immediately.
186:
187: The static binary should be slightly faster. In any case, this should not
188: take more than one minute (user time) on modern machines. See the file
189: \kbd{MACHINES} to get an idea of how much time comparable systems need (we
190: would appreciate a short note in the same format in case your system is not
191: listed and you nevertheless have a working GP executable).
192:
193: If a \kbd{[BUG]} message shows up, something went wrong. Probably with the
194: installation procedure, but it may be a bug in the Pari system, in which
195: case we would appreciate a report (including the relevant \kbd{*.dif} file
196: in the \kbd{O$xxx$} directory and the file \kbd{dft.Config.in}).
197:
198: \misctitle{Known problems:}
199:
200: $\bullet$ \kbd{elliptic}: the test \kbd{cmcurve=ellinit([0,-3/4,0,-2,-1])}
201: may give results which differ slightly from the template (last decimal in a
202: few entries). This ultimately depends on the output of
203:
204: \kbd{polroots(x\pow 3-3/4*x\pow 2-2*x-1)[1]}
205:
206: \noindent at \kbd{\b{p}38}, which may be $2.0$ or $1.999\dots$ depending on
207: your hardware, libraries, compiler\dots Intel Pentiums running Linux often
208: trigger this \kbd{BUG} (unrelated to the infamous \kbd{fdiv} bug), which
209: can safely be ignored in any case: both results are correct given the
210: requested precision.
211:
212: $\bullet$ \kbd{program}: the GP function \kbd{install} may not be available on
213: your platform, triggering an error message (``not yet available for this
214: architecture''). Have a look at the \kbd{MACHINES} files (the \kbd{dl}
215: column) to check if your system is known not to support it, or has never
216: been tested yet.
217:
218: $\bullet$ If when running \kbd{gp-dyn}, you get a message of the form
219:
220: \kbd{ld.so: warning: libpari.so.$xxx$ has older revision than expected $xxx$}
221:
222: \noindent (possibly followed by more errors), you already have a dynamic PARI
223: library installed {\it and\/} a broken local configuration. Either remove the
224: old library or unset the \kbd{LD\_LIBRARY\_PATH} environment variable. Try to
225: disable this variable in any case if anything {\it very} wrong occurs with
226: the \kbd{gp-dyn} binary (e.g Illegal Instruction on startup). It doesn't
227: affect \kbd{gp-sta}.
228:
229: \subsubsec{Some more testing} [{\sl Optional\/}]
230:
231: You can test GP in compatibility mode with \kbd{make test-compat}. If you
232: want to test the graphic routines, use \kbd{make test-graphic}. You will
233: have to click on the mouse button after seeing each image (under X11).
234: There will be eight of them, probably shown twice (under X11, try to resize
235: at least one of them as a further test).
236:
237: The \kbd{make bench} and \kbd{make test-compat} runs produce a Postscript
238: file \kbd{pari.ps} in \kbd{O$xxx$} which you can send to a Postscript
239: printer. The output should bear some similarity to the screen images.
240:
241: \section{Installation} When everything looks fine, type
242:
243: \kbd{make install}
244:
245: \noindent (You may have to do this with superuser privileges, depending on
246: the target directories.) Beware that, if you chose the same installation
247: directory as before in the \kbd{Configure} process, this will wipe out any
248: files from version 1.39.15 and below that might already be there. Libraries
249: and executable files from newer versions (starting with version 1.900) are
250: not removed since they are only links to files bearing the version number
251: (beware of that as well: if you're an avid GP fan, don't forget to delete the
252: old pari libraries once in a while).
253:
254: This installs in the directories chosen at \kbd{Configure} time the default
255: GP executable (probably \kbd{gp-dyn}) under the name \kbd{gp}, the default
256: PARI library (probably \kbd{libpari.so}), the necessary include files, the
257: manual pages, the documentation and help scripts and emacs macros.
258:
259: By default, if a dynamic library \kbd{libpari.so} could be built, the static
260: library \kbd{libpari.a} will not be created. If you want it as well, you can
261: use the target \kbd{make install-lib-sta}. You can install a statically
262: linked \kbd{gp} with the target \kbd{make install-bin-sta}. As a rule,
263: programs linked statically (with \kbd{libpari.a}) may be slightly faster
264: (about 5\% gain), but use much more disk space and take more time to compile.
265: They are also harder to upgrade: you will have to recompile them all instead
266: of just installing the new dynamic library. On the other hand, there's no
267: risk of breaking them by installing a new pari library.
268:
269: \subsec{The Galois package:} The default \kbd{polgalois} function can only
270: compute Galois groups of polynomials of degree less or equal to 7. If you
271: want to handle polynomials of degree bigger than 7 (and less than 11), you
272: need to fetch a separate archive: \kbd{galdata.tgz} which can probably be
273: found at the same place where you got the main PARI archive, and on the
274: \kbd{megrez} ftp server in any case. Untar the archive in the \kbd{datadir}
275: directory which was chosen at \kbd{Configure} time (it's one of the last
276: messages on the screen if you did not run \kbd{Configure -a}). You can then
277: test the \kbd{polgalois} function with your favourite polynomials.
278:
279: \subsec{The \kbd{GPRC} file:} Copy the file \kbd{misc/gprc.dft} (or
280: \kbd{gprc.dos} if you're using \kbd{GP.EXE}) to \kbd{\$HOME/.gprc}. Modify
281: it to your liking. For instance, if you're not using an ANSI terminal,
282: remove control characters from the \kbd{prompt} variable. You can also
283: enable colors.
284:
285: If desired, also copy/modify \kbd{misc/gpalias} somewhere and call it from
286: the \kbd{gprc} file (this provides some common shortcuts to lengthy names).
287: Finally, if you have superuser privileges and want to provide system-wide
288: defaults, you can copy your customized \kbd{.gprc} file to \kbd{/etc/gprc}.
289:
290: In older versions, \kbd{gphelp} was hidden in pari lib directory and wasn't
291: meant to be used from the shell prompt, but not anymore. If gp complains it
292: can't find \kbd{gphelp}, check whether your \kbd{.gprc} (or the system-wide
293: \kbd{gprc}) does contain explicit paths. If so, correct them according to the
294: current \kbd{misc/gprc.dft}.
295:
296: \section{Getting Started}
297:
298: \subsec{Printable Documentation:} To print the user's guide, for which you'll
299: need a working (plain) \TeX\ installation; type
300:
301: \kbd{make doc}
302:
303: \noindent This will create, in two passes, a file \kbd{doc/users.dvi}
304: containing the manual with a table of contents and an index. You must then
305: send the \kbd{users.dvi} file to your favourite printer in the usual way,
306: probably via \kbd{dvips}. Also included are a short tutorial
307: (\kbd{doc/tutorial.dvi}) and a reference card (\kbd{doc/refcard.dvi}
308: and \kbd{doc/refcard.ps}) for GP.
309:
310: \noindent If the \kbd{pdftex} package is part of your \TeX\ setup, you can
311: produce these documents in PDF format, which may be more convenient for
312: online browsing (the manual is complete with hyperlinks); type
313:
314: \kbd{make docpdf}
315:
316: \noindent All these documents are available online from PARI home page and on
317: the \kbd{megrez} ftp server.
318:
319: \subsec{C programming:} Once all libraries and include files are installed,
320: you can link your C programs to the PARI library. A sample makefile
321: \kbd{examples/Makefile} is provided to illustrate the use of the various
322: libraries. Type \kbd{make all} in the \kbd{examples} directory to see how
323: they perform on the \kbd{mattrans.c} program, which is commented in the
324: manual.
325:
326: \subsec{GP scripts:} Several complete sample GP programs are also given in
327: the \kbd{examples} directory, for example Shanks's SQUFOF factoring method,
328: the Pollard rho factoring method, the Lucas-Lehmer primality test for
329: Mersenne numbers and a simple general class group and fundamental unit
330: algorithm (much worse than the built-in \kbd{bnfinit}!). See the file
331: \kbd{examples/EXPLAIN} for some explanations.
332:
333: \subsec{EMACS:} If you want to use \kbd{gp} under GNU Emacs, read the file
334: \kbd{emacs/pariemacs.txt}. If you are familiar with Emacs, we suggest that
335: you do~so.
336:
337: \subsec{The PARI Community:} There are three mailing lists devoted to the
338: PARI/GP package (run courtesy of Dan Bernstein), and most feedback should be
339: directed to those. They are:
340:
341: $\bullet$ \kbd{pari-announce}: to announce major version changes.
342: You can't write to this one, but you should probably subscribe.
343:
344: $\bullet$ \kbd{pari-dev}: for everything related to the development
345: of PARI, including suggestions, technical questions, bug reports or patch
346: submissions.
347:
348: $\bullet$ \kbd{pari-users}: for everything else.
349:
350: \noindent To subscribe, send empty messages respectively to
351:
352: \centerline{\kbd{pari-announce-subscribe@list.cr.yp.to}}
353:
354: \centerline{\kbd{pari-users-subscribe@list.cr.yp.to}}
355:
356: \centerline{\kbd{pari-dev-subscribe@list.cr.yp.to}}
357:
358: \noindent The PARI home page (maintained by Gerhard Niklasch) at the address
359:
360: \centerline{\wwwsite}
361:
362: \noindent maintains an archive of all discussions as well as a download area.
363: If don't want to subscribe to those lists, you can write to us at the address
364:
365: \centerline{\kbd{pari@math.u-bordeaux.fr}}
366:
367: \noindent At the very least, we will forward you mail to the lists above and
368: correct faulty behaviour, if necessary. But we cannot promise you will get an
369: individual answer.
370:
371: If you have used PARI in the preparation of a paper, please cite it in the
372: following form (BibTeX format):
373:
374: \def\@{@}
375: \bprog
376: @@manual{PARI2,
377: organization = "{The PARI~Group}",
378: title = "{PARI/GP, Version @vers}",
379: year = 2000,
380: address = "Bordeaux",
381: note = "available from {\tt @wwwsite}"
382: }
383: @eprog
384: \smallskip
385:
386: \noindent In any case, if you like this software, we would be indebted if you
387: could send us an email message giving us some information about yourself and
388: what you use PARI for.
389:
390: \medskip
391: {\bf Good luck and enjoy!}
392: \vfill\eject
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